Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AL353705.2-201ENST00000428243 662 ntBASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AC003101.2-201ENST00000612557 442 ntBASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AC009093.7-201ENST00000623853 1223 ntBASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHRDL1Q9BU40 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 SPDYE14P-201ENST00000442619 822 ntBASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 AC023141.5-201ENST00000458585 616 ntBASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 BANF1P1-201ENST00000553684 263 ntBASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 AC026150.2-201ENST00000564693 1156 ntBASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 MIR4313-201ENST00000580760 101 ntBASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 AC134684.3-201ENST00000641758 218 ntBASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHRDL1Q9BU40 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms