Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 AC126915.1-201ENST00000522847 1038 ntBASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 RHOQP1-201ENST00000555758 579 ntBASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 BNIP3P13-201ENST00000599968 566 ntBASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP2Q96SN8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AKR7A2P1-201ENST00000460134 915 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC090164.2-201ENST00000611487 516 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 E2F3P2-201ENST00000447755 1422 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC091951.1-201ENST00000512854 2465 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 ACTG1P2-201ENST00000415776 1125 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 ACTG1P11-201ENST00000425411 1125 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 PDIA3P2-201ENST00000428073 158 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AL157407.1-201ENST00000435784 904 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 AC009779.1-201ENST00000551138 283 ntBASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP2Q96SN8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 AC008132.1-202ENST00000342005 1389 ntBASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 SPTLC1P5-201ENST00000450718 252 ntBASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.74■□□□□ 0.43
CDK5RAP2Q96SN8 AL136301.1-201ENST00000615830 422 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms