Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LRRC46Q96FV0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC46Q96FV0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.04□□□□□ -0.16
LRRC46Q96FV0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRRC46Q96FV0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 MIR658-201ENST00000385210 100 ntBASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AC133539.2-201ENST00000604757 467 ntBASIC14.03□□□□□ -0.16
LRRC46Q96FV0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AC133552.6-201ENST00000613406 534 ntBASIC14.03□□□□□ -0.16
LRRC46Q96FV0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AC022532.1-201ENST00000624563 1728 ntBASIC14.03□□□□□ -0.16
LRRC46Q96FV0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRC46Q96FV0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.02□□□□□ -0.16
LRRC46Q96FV0 AC026748.1-201ENST00000624349 3251 ntBASIC14.02□□□□□ -0.16
LRRC46Q96FV0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LRRC46Q96FV0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 RPS2P32-201ENST00000439199 892 ntBASIC14.02□□□□□ -0.17
LRRC46Q96FV0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC46Q96FV0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms