Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.63■□□□□ 0.57
CNKSR1Q969H4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 RPL5P21-201ENST00000404620 815 ntBASIC18.63■□□□□ 0.57
CNKSR1Q969H4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 HLA-J-204ENST00000495278 958 ntBASIC18.63■□□□□ 0.57
CNKSR1Q969H4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 E2F3P2-201ENST00000447755 1422 ntBASIC18.63■□□□□ 0.57
CNKSR1Q969H4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR1Q969H4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 REXO1L5P-201ENST00000622260 2098 ntBASIC18.62■□□□□ 0.57
CNKSR1Q969H4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 RPSAP31-201ENST00000416648 895 ntBASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AC073150.1-201ENST00000450406 1084 ntBASIC18.62■□□□□ 0.57
CNKSR1Q969H4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AL805961.1-201ENST00000642026 753 ntBASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 MTHFR-217ENST00000641820 1569 ntBASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AC127383.1-201ENST00000444697 1800 ntBASIC18.62■□□□□ 0.57
CNKSR1Q969H4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 AC084018.2-201ENST00000613093 2607 ntBASIC18.62■□□□□ 0.57
CNKSR1Q969H4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CNKSR1Q969H4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 TBC1D3J-201ENST00000620719 1426 ntBASIC18.61■□□□□ 0.57
CNKSR1Q969H4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR1Q969H4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms