Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL22A1Q8NFW1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL22A1Q8NFW1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL22A1Q8NFW1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL22A1Q8NFW1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
COL22A1Q8NFW1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.89■□□□□ 0.78
COL22A1Q8NFW1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 AL590440.2-201ENST00000641973 1595 ntBASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL22A1Q8NFW1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 UROS-201ENST00000368774 744 ntTSL 2 BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 ERP29P1-201ENST00000442902 706 ntBASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 FAM86B3P-203ENST00000523992 854 ntBASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 HMGB1P24-201ENST00000611897 328 ntBASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL22A1Q8NFW1 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
COL22A1Q8NFW1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 SURF4-203ENST00000371991 715 ntTSL 3 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.86■□□□□ 0.77
COL22A1Q8NFW1 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms