Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DNAAF1Q8NEP3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 AC023274.1-201ENST00000418278 595 ntBASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 EEF1DP4-201ENST00000446006 880 ntBASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 C20orf181-201ENST00000623918 480 ntBASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 CICP14-201ENST00000629111 2732 ntBASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 AC140479.7-201ENST00000636301 2332 ntBASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DNAAF1Q8NEP3 LINC01230-201ENST00000625222 3017 ntBASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 YBX2P1-201ENST00000394192 760 ntBASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 AC004832.2-201ENST00000426397 482 ntBASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 AC079140.1-201ENST00000508039 487 ntBASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DNAAF1Q8NEP3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms