Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 MIR6858-201ENST00000620733 67 ntBASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCDC168Q8NDH2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 RPL8P2-201ENST00000430538 502 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 RBM8B-201ENST00000555532 525 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 MIR5196-201ENST00000578146 115 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 AC021016.3-201ENST00000608367 477 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 PTPN20CP-201ENST00000614090 920 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 LINC00431-202ENST00000636375 159 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 CHMP1AP1-201ENST00000445563 662 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 AC018463.1-201ENST00000456674 917 ntBASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCDC168Q8NDH2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 AC078875.1-201ENST00000431907 724 ntBASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 AC097359.3-201ENST00000603982 1210 ntBASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 AL132780.4-201ENST00000624870 1135 ntBASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 BX323043.1-201ENST00000641006 1765 ntBASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 AL662844.4-201ENST00000606367 2838 ntBASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCDC168Q8NDH2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 ACTBP7-201ENST00000418351 1124 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CHCHD2P9-201ENST00000461726 456 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 RPL18AP3-201ENST00000462885 528 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AC084752.1-201ENST00000509766 622 ntBASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 MME-218ENST00000625667 363 ntTSL 5 BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC168Q8NDH2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms