Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAM1L1Q8N609 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAM1L1Q8N609 WASH3P-207ENST00000560956 1394 ntBASIC15.21■□□□□ 0.02
TRAM1L1Q8N609 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAM1L1Q8N609 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TRAM1L1Q8N609 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
TRAM1L1Q8N609 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 RNU1-114P-201ENST00000365297 166 ntBASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 AL139094.1-201ENST00000405549 1188 ntBASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 KLF2P2-201ENST00000416807 1039 ntBASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 AC008735.3-201ENST00000596646 500 ntBASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 AC126177.1-201ENST00000547829 2218 ntBASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAM1L1Q8N609 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC134312.5-201ENST00000568031 1313 ntBASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 TMEM14DP-201ENST00000422205 345 ntBASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 USP32P1-208ENST00000506594 1164 ntBASIC15.19■□□□□ 0.02
TRAM1L1Q8N609 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms