Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 PRSS30P-206ENST00000641773 873 ntBASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AC126177.1-201ENST00000547829 2218 ntBASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 AC134312.5-201ENST00000568031 1313 ntBASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 KLF2P2-201ENST00000416807 1039 ntBASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 AP001889.1-201ENST00000525414 633 ntBASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 AC233724.13-201ENST00000598383 410 ntBASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
C9orf40Q8IXQ3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 MROH4P-201ENST00000431302 1578 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AC091951.1-201ENST00000512854 2465 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms