Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HERC4Q5GLZ8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 KRT8P44-201ENST00000441609 1350 ntBASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 RPL5P21-201ENST00000404620 815 ntBASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 KRT18P43-201ENST00000469825 1281 ntBASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HERC4Q5GLZ8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 GNAQP1-201ENST00000444815 1067 ntBASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 AC119751.2-201ENST00000504529 210 ntBASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 AC008494.3-201ENST00000606615 944 ntBASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 COX11-210ENST00000639671 696 ntBASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HERC4Q5GLZ8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 AC148477.4-201ENST00000613430 1793 ntBASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HERC4Q5GLZ8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 AC126365.1-201ENST00000578585 1514 ntBASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HERC4Q5GLZ8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms