Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL16A1Q07092 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COL16A1Q07092 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.06■□□□□ 0.8
COL16A1Q07092 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COL16A1Q07092 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COL16A1Q07092 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 RPL3P5-201ENST00000441645 1232 ntBASIC20.06■□□□□ 0.8
COL16A1Q07092 AC063952.3-201ENST00000467756 308 ntBASIC20.06■□□□□ 0.8
COL16A1Q07092 AC018846.1-201ENST00000568231 183 ntBASIC20.06■□□□□ 0.8
COL16A1Q07092 AC011462.4-201ENST00000616866 449 ntBASIC20.06■□□□□ 0.8
COL16A1Q07092 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC20.06■□□□□ 0.8
COL16A1Q07092 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL16A1Q07092 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL16A1Q07092 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL16A1Q07092 AC021305.1-201ENST00000520656 1514 ntBASIC20.06■□□□□ 0.8
COL16A1Q07092 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
COL16A1Q07092 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL16A1Q07092 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
COL16A1Q07092 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL16A1Q07092 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.06■□□□□ 0.8
COL16A1Q07092 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL16A1Q07092 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.06■□□□□ 0.8
COL16A1Q07092 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.06■□□□□ 0.8
COL16A1Q07092 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL16A1Q07092 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL16A1Q07092 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL16A1Q07092 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL16A1Q07092 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 MIR1301-201ENST00000408518 82 ntBASIC20.05■□□□□ 0.8
COL16A1Q07092 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.05■□□□□ 0.8
COL16A1Q07092 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC20.05■□□□□ 0.8
COL16A1Q07092 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.05■□□□□ 0.8
COL16A1Q07092 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 AHCYP4-201ENST00000419201 1315 ntBASIC20.05■□□□□ 0.8
COL16A1Q07092 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.05■□□□□ 0.8
COL16A1Q07092 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL16A1Q07092 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.05■□□□□ 0.8
COL16A1Q07092 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.05■□□□□ 0.8
COL16A1Q07092 AF274858.1-201ENST00000406288 372 ntBASIC20.05■□□□□ 0.8
COL16A1Q07092 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL16A1Q07092 ACTG1P19-201ENST00000418987 1116 ntBASIC20.05■□□□□ 0.8
COL16A1Q07092 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC20.05■□□□□ 0.8
COL16A1Q07092 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 RN7SL23P-201ENST00000484055 275 ntBASIC20.05■□□□□ 0.8
COL16A1Q07092 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC20.05■□□□□ 0.8
COL16A1Q07092 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC20.05■□□□□ 0.8
COL16A1Q07092 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC20.05■□□□□ 0.8
COL16A1Q07092 AC027601.3-201ENST00000622907 509 ntBASIC20.05■□□□□ 0.8
COL16A1Q07092 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL16A1Q07092 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.05■□□□□ 0.8
COL16A1Q07092 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
COL16A1Q07092 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COL16A1Q07092 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL16A1Q07092 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.04■□□□□ 0.8
COL16A1Q07092 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.04■□□□□ 0.8
COL16A1Q07092 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.04■□□□□ 0.8
COL16A1Q07092 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 MTHFR-217ENST00000641820 1569 ntBASIC20.04■□□□□ 0.8
COL16A1Q07092 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.04■□□□□ 0.8
COL16A1Q07092 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 RPL5P21-201ENST00000404620 815 ntBASIC20.04■□□□□ 0.8
COL16A1Q07092 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.04■□□□□ 0.8
COL16A1Q07092 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC20.04■□□□□ 0.8
COL16A1Q07092 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.04■□□□□ 0.8
COL16A1Q07092 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.04■□□□□ 0.8
COL16A1Q07092 TRMT112P3-201ENST00000580149 358 ntBASIC20.04■□□□□ 0.8
COL16A1Q07092 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.04■□□□□ 0.8
COL16A1Q07092 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.04■□□□□ 0.8
COL16A1Q07092 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.04■□□□□ 0.8
COL16A1Q07092 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL16A1Q07092 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.04■□□□□ 0.8
COL16A1Q07092 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.03■□□□□ 0.8
COL16A1Q07092 TMBIM7P-202ENST00000641474 1516 ntBASIC20.03■□□□□ 0.8
COL16A1Q07092 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms