Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDN12P56749 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLDN12P56749 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 AC084364.1-201ENST00000551967 1556 ntBASIC13.49□□□□□ -0.25
CLDN12P56749 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 AP000845.1-201ENST00000581677 2131 ntBASIC13.49□□□□□ -0.25
CLDN12P56749 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN12P56749 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN12P56749 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN12P56749 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN12P56749 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN12P56749 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.49□□□□□ -0.25
CLDN12P56749 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN12P56749 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLDN12P56749 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDN12P56749 AC099522.2-201ENST00000607001 744 ntBASIC13.49□□□□□ -0.25
CLDN12P56749 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLDN12P56749 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN12P56749 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN12P56749 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN12P56749 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CLDN12P56749 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLDN12P56749 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CLDN12P56749 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN12P56749 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
CLDN12P56749 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN12P56749 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN12P56749 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN12P56749 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDN12P56749 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CLDN12P56749 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CLDN12P56749 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 AP001267.2-201ENST00000532619 2086 ntBASIC13.48□□□□□ -0.25
CLDN12P56749 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CLDN12P56749 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CLDN12P56749 AC002056.1-201ENST00000395613 760 ntBASIC13.48□□□□□ -0.25
CLDN12P56749 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.48□□□□□ -0.25
CLDN12P56749 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 AL139010.1-201ENST00000454878 894 ntBASIC13.48□□□□□ -0.25
CLDN12P56749 IGHV3-22-201ENST00000520721 359 ntBASIC13.48□□□□□ -0.25
CLDN12P56749 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN12P56749 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CLDN12P56749 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
CLDN12P56749 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.48□□□□□ -0.25
CLDN12P56749 RARRES2P8-201ENST00000566335 367 ntBASIC13.48□□□□□ -0.25
CLDN12P56749 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms