Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDH13P55290 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 AL359258.3-201ENST00000622910 2331 ntBASIC15.16■□□□□ 0.02
CDH13P55290 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH13P55290 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH13P55290 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH13P55290 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH13P55290 AC015656.1-201ENST00000624209 3578 ntBASIC15.15■□□□□ 0.02
CDH13P55290 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDH13P55290 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 RPL37AP1-201ENST00000412502 279 ntBASIC15.15■□□□□ 0.02
CDH13P55290 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 SLED1-202ENST00000512051 380 ntBASIC15.15■□□□□ 0.02
CDH13P55290 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH13P55290 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH13P55290 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH13P55290 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 AC025048.3-201ENST00000590609 569 ntBASIC15.15■□□□□ 0.02
CDH13P55290 AC005702.4-201ENST00000618393 416 ntBASIC15.15■□□□□ 0.02
CDH13P55290 LINC00628-201ENST00000628516 1289 ntBASIC15.15■□□□□ 0.02
CDH13P55290 AL033527.5-202ENST00000641632 1098 ntBASIC15.15■□□□□ 0.02
CDH13P55290 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CDH13P55290 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH13P55290 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH13P55290 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH13P55290 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 REXO1L2P-201ENST00000425429 2069 ntBASIC15.15■□□□□ 0.02
CDH13P55290 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH13P55290 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH13P55290 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CDH13P55290 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH13P55290 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 Z97205.2-201ENST00000564697 1639 ntBASIC15.14■□□□□ 0.01
CDH13P55290 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.14■□□□□ 0.01
CDH13P55290 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CDH13P55290 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CDH13P55290 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH13P55290 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH13P55290 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms