Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFSF9P41273 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFSF9P41273 AP000845.1-201ENST00000581677 2131 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TNFSF9P41273 AC022532.1-201ENST00000624563 1728 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 ARSEP1-201ENST00000420443 635 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 HLA-K-203ENST00000430151 1046 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFSF9P41273 AL355864.2-201ENST00000447420 863 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 GPR53P-205ENST00000457298 1084 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 FTH1P14-201ENST00000482930 551 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFSF9P41273 AL022328.1-201ENST00000610050 478 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 AC244669.2-201ENST00000612320 853 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFSF9P41273 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFSF9P41273 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TNFSF9P41273 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TNFSF9P41273 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFSF9P41273 KRT8P35-201ENST00000483942 1338 ntBASIC16.63■□□□□ 0.25
TNFSF9P41273 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFSF9P41273 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFSF9P41273 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFSF9P41273 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TNFSF9P41273 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 ANKRD19P-201ENST00000338192 862 ntBASIC16.62■□□□□ 0.25
TNFSF9P41273 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TNFSF9P41273 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 AL139094.1-201ENST00000405549 1188 ntBASIC16.62■□□□□ 0.25
TNFSF9P41273 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.62■□□□□ 0.25
TNFSF9P41273 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.62■□□□□ 0.25
TNFSF9P41273 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.62■□□□□ 0.25
TNFSF9P41273 AC145423.3-201ENST00000615987 467 ntBASIC16.62■□□□□ 0.25
TNFSF9P41273 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.62■□□□□ 0.25
TNFSF9P41273 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFSF9P41273 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNFSF9P41273 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFSF9P41273 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFSF9P41273 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFSF9P41273 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFSF9P41273 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.61■□□□□ 0.25
TNFSF9P41273 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TNFSF9P41273 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFSF9P41273 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFSF9P41273 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TNFSF9P41273 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFSF9P41273 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms