Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.29■□□□□ 0.68
COL15A1P39059 AC024681.1-201ENST00000521917 487 ntBASIC19.29■□□□□ 0.68
COL15A1P39059 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.29■□□□□ 0.68
COL15A1P39059 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL15A1P39059 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.29■□□□□ 0.68
COL15A1P39059 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.28■□□□□ 0.68
COL15A1P39059 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.28■□□□□ 0.68
COL15A1P39059 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
COL15A1P39059 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL15A1P39059 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL15A1P39059 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.28■□□□□ 0.68
COL15A1P39059 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 CICP13-201ENST00000422015 2789 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.28■□□□□ 0.68
COL15A1P39059 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 AL008707.1-201ENST00000422498 534 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.28■□□□□ 0.68
COL15A1P39059 MPRIPP1-201ENST00000452433 1089 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 RPS2P36-201ENST00000456516 831 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 MESTP3-201ENST00000503460 968 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 NUP210P1-202ENST00000504322 710 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 AC106794.1-201ENST00000506935 792 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
COL15A1P39059 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.28■□□□□ 0.68
COL15A1P39059 MIR4783-201ENST00000580343 82 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.28■□□□□ 0.68
COL15A1P39059 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.28■□□□□ 0.68
COL15A1P39059 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.28■□□□□ 0.68
COL15A1P39059 AL023803.2-201ENST00000620080 638 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 AC128714.1-201ENST00000637035 887 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL15A1P39059 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.28■□□□□ 0.68
COL15A1P39059 AC008894.3-201ENST00000624324 3103 ntBASIC19.28■□□□□ 0.68
COL15A1P39059 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
COL15A1P39059 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
COL15A1P39059 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.27■□□□□ 0.68
COL15A1P39059 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.27■□□□□ 0.68
COL15A1P39059 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.27■□□□□ 0.68
COL15A1P39059 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.27■□□□□ 0.68
COL15A1P39059 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.27■□□□□ 0.68
COL15A1P39059 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL15A1P39059 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 AC007274.2-201ENST00000421675 662 ntBASIC19.27■□□□□ 0.68
COL15A1P39059 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.27■□□□□ 0.68
COL15A1P39059 RNMTL1P1-201ENST00000454103 560 ntBASIC19.27■□□□□ 0.68
COL15A1P39059 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.27■□□□□ 0.68
COL15A1P39059 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 AC134698.3-201ENST00000523880 214 ntBASIC19.27■□□□□ 0.68
COL15A1P39059 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.27■□□□□ 0.68
COL15A1P39059 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.27■□□□□ 0.68
COL15A1P39059 BNIP3P13-201ENST00000599968 566 ntBASIC19.27■□□□□ 0.68
COL15A1P39059 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.27■□□□□ 0.68
COL15A1P39059 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL15A1P39059 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL15A1P39059 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL15A1P39059 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL15A1P39059 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL15A1P39059 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL15A1P39059 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
COL15A1P39059 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.27■□□□□ 0.67
COL15A1P39059 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL15A1P39059 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.27■□□□□ 0.67
COL15A1P39059 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.27■□□□□ 0.67
COL15A1P39059 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL15A1P39059 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.26■□□□□ 0.67
COL15A1P39059 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.26■□□□□ 0.67
COL15A1P39059 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 AC132872.4-202ENST00000622924 2756 ntBASIC19.26■□□□□ 0.67
COL15A1P39059 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL15A1P39059 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms