Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLCN1P35523 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLCN1P35523 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLCN1P35523 ST20-AS1-201ENST00000560255 4223 ntBASIC17.64■□□□□ 0.42
CLCN1P35523 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.64■□□□□ 0.42
CLCN1P35523 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN1P35523 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLCN1P35523 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 MTHFR-210ENST00000641407 2387 ntBASIC17.64■□□□□ 0.41
CLCN1P35523 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
CLCN1P35523 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLCN1P35523 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN1P35523 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 AC092865.6-201ENST00000642101 219 ntBASIC17.64■□□□□ 0.41
CLCN1P35523 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLCN1P35523 CICP16-201ENST00000502609 2813 ntBASIC17.64■□□□□ 0.41
CLCN1P35523 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN1P35523 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 ZNF259P1-201ENST00000407656 1365 ntBASIC17.64■□□□□ 0.41
CLCN1P35523 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN1P35523 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 AC126755.1-201ENST00000525846 6405 ntBASIC17.64■□□□□ 0.41
CLCN1P35523 AC005622.1-201ENST00000636801 1703 ntBASIC17.64■□□□□ 0.41
CLCN1P35523 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN1P35523 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN1P35523 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCN1P35523 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.63■□□□□ 0.41
CLCN1P35523 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCN1P35523 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.63■□□□□ 0.41
CLCN1P35523 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.63■□□□□ 0.41
CLCN1P35523 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.63■□□□□ 0.41
CLCN1P35523 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLCN1P35523 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCN1P35523 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.63■□□□□ 0.41
CLCN1P35523 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCN1P35523 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.63■□□□□ 0.41
CLCN1P35523 AC140113.2-201ENST00000604370 208 ntBASIC17.63■□□□□ 0.41
CLCN1P35523 AL513190.1-201ENST00000621254 727 ntBASIC17.63■□□□□ 0.41
CLCN1P35523 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCN1P35523 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLCN1P35523 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLCN1P35523 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLCN1P35523 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCN1P35523 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCN1P35523 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN1P35523 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN1P35523 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCN1P35523 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN1P35523 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN1P35523 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCN1P35523 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCN1P35523 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLCN1P35523 HCG24-202ENST00000414398 717 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCN1P35523 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN1P35523 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN1P35523 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms