Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC133540.1-201ENST00000620845 1019 ntBASIC19.66■□□□□ 0.74
RXRBP28702 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRBP28702 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RXRBP28702 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 AC011477.6-201ENST00000604980 1927 ntBASIC19.65■□□□□ 0.74
RXRBP28702 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC19.65■□□□□ 0.74
RXRBP28702 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC19.65■□□□□ 0.74
RXRBP28702 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC19.65■□□□□ 0.74
RXRBP28702 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 AC004466.2-201ENST00000614749 516 ntBASIC19.65■□□□□ 0.74
RXRBP28702 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RXRBP28702 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RXRBP28702 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.65■□□□□ 0.74
RXRBP28702 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RXRBP28702 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RXRBP28702 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.65■□□□□ 0.74
RXRBP28702 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RXRBP28702 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RXRBP28702 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.64■□□□□ 0.74
RXRBP28702 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RXRBP28702 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RXRBP28702 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RXRBP28702 XBP1P1-201ENST00000436573 652 ntBASIC19.64■□□□□ 0.73
RXRBP28702 HIST1H2APS2-201ENST00000454426 370 ntBASIC19.64■□□□□ 0.73
RXRBP28702 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.64■□□□□ 0.73
RXRBP28702 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC19.64■□□□□ 0.73
RXRBP28702 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC19.64■□□□□ 0.73
RXRBP28702 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 CTBP2P6-201ENST00000526402 1229 ntBASIC19.64■□□□□ 0.73
RXRBP28702 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.64■□□□□ 0.73
RXRBP28702 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.64■□□□□ 0.73
RXRBP28702 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RXRBP28702 AC025183.3-201ENST00000623526 1482 ntBASIC19.64■□□□□ 0.73
RXRBP28702 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
RXRBP28702 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 REXO1L5P-201ENST00000622260 2098 ntBASIC19.64■□□□□ 0.73
RXRBP28702 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
RXRBP28702 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RXRBP28702 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.63■□□□□ 0.73
RXRBP28702 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RXRBP28702 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC19.63■□□□□ 0.73
RXRBP28702 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.63■□□□□ 0.73
RXRBP28702 OLA1P2-201ENST00000395519 1264 ntBASIC19.63■□□□□ 0.73
RXRBP28702 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RXRBP28702 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC19.63■□□□□ 0.73
RXRBP28702 AC108734.2-201ENST00000420887 1069 ntBASIC19.63■□□□□ 0.73
RXRBP28702 ERP29P1-201ENST00000442902 706 ntBASIC19.63■□□□□ 0.73
RXRBP28702 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.63■□□□□ 0.73
RXRBP28702 DUX4L50-201ENST00000455245 715 ntBASIC19.63■□□□□ 0.73
RXRBP28702 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC19.63■□□□□ 0.73
RXRBP28702 URB1-AS1-201ENST00000534991 831 ntBASIC19.63■□□□□ 0.73
RXRBP28702 AC142086.5-202ENST00000562500 217 ntBASIC19.63■□□□□ 0.73
RXRBP28702 MIR2392-201ENST00000584881 84 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 960 ms