Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.04□□□□□ -0.16
APEX1P27695 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.04□□□□□ -0.16
APEX1P27695 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.04□□□□□ -0.16
APEX1P27695 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.04□□□□□ -0.16
APEX1P27695 MIR4453-201ENST00000584019 89 ntBASIC14.04□□□□□ -0.16
APEX1P27695 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 LINC01230-201ENST00000625222 3017 ntBASIC14.04□□□□□ -0.16
APEX1P27695 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APEX1P27695 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
APEX1P27695 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APEX1P27695 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.04□□□□□ -0.16
APEX1P27695 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APEX1P27695 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.03□□□□□ -0.16
APEX1P27695 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 AC134407.2-201ENST00000625089 1978 ntBASIC14.03□□□□□ -0.16
APEX1P27695 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.03□□□□□ -0.16
APEX1P27695 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.03□□□□□ -0.16
APEX1P27695 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APEX1P27695 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.03□□□□□ -0.16
APEX1P27695 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
APEX1P27695 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.03□□□□□ -0.16
APEX1P27695 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
APEX1P27695 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 CNN2P2-201ENST00000443536 909 ntBASIC14.03□□□□□ -0.16
APEX1P27695 CNN2P3-201ENST00000450201 906 ntBASIC14.03□□□□□ -0.16
APEX1P27695 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.03□□□□□ -0.16
APEX1P27695 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.03□□□□□ -0.16
APEX1P27695 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.03□□□□□ -0.16
APEX1P27695 SPCS2P1-201ENST00000561636 679 ntBASIC14.03□□□□□ -0.16
APEX1P27695 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.03□□□□□ -0.16
APEX1P27695 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.03□□□□□ -0.16
APEX1P27695 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APEX1P27695 AL136317.3-201ENST00000618497 906 ntBASIC14.03□□□□□ -0.16
APEX1P27695 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
APEX1P27695 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APEX1P27695 MROH4P-201ENST00000431302 1578 ntBASIC14.03□□□□□ -0.16
APEX1P27695 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.03□□□□□ -0.16
APEX1P27695 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APEX1P27695 SBF1P1-201ENST00000444527 5631 ntBASIC14.02□□□□□ -0.16
APEX1P27695 OR2I1P-209ENST00000641730 5365 ntBASIC14.02□□□□□ -0.16
APEX1P27695 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 ST20-AS1-201ENST00000560255 4223 ntBASIC14.02□□□□□ -0.16
APEX1P27695 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 AC010327.5-201ENST00000586923 3061 ntBASIC14.02□□□□□ -0.16
APEX1P27695 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
APEX1P27695 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
APEX1P27695 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APEX1P27695 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.02□□□□□ -0.16
APEX1P27695 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.02□□□□□ -0.16
APEX1P27695 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 AC009090.5-201ENST00000624886 2285 ntBASIC14.02□□□□□ -0.16
APEX1P27695 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.02□□□□□ -0.16
APEX1P27695 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.02□□□□□ -0.16
APEX1P27695 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.02□□□□□ -0.16
APEX1P27695 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
APEX1P27695 AL136982.4-201ENST00000437689 1740 ntBASIC14.02□□□□□ -0.16
APEX1P27695 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APEX1P27695 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APEX1P27695 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms