Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.05□□□□□ -0.32
COL8A2P25067 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
COL8A2P25067 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
COL8A2P25067 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 ANKRD19P-201ENST00000338192 862 ntBASIC13.05□□□□□ -0.32
COL8A2P25067 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.05□□□□□ -0.32
COL8A2P25067 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.05□□□□□ -0.32
COL8A2P25067 AL355864.2-201ENST00000447420 863 ntBASIC13.05□□□□□ -0.32
COL8A2P25067 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.05□□□□□ -0.32
COL8A2P25067 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
COL8A2P25067 AC119751.2-201ENST00000504529 210 ntBASIC13.05□□□□□ -0.32
COL8A2P25067 AC104989.1-201ENST00000519711 778 ntBASIC13.05□□□□□ -0.32
COL8A2P25067 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.05□□□□□ -0.32
COL8A2P25067 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.05□□□□□ -0.32
COL8A2P25067 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.05□□□□□ -0.32
COL8A2P25067 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.05□□□□□ -0.32
COL8A2P25067 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.05□□□□□ -0.32
COL8A2P25067 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 AL138799.1-201ENST00000448213 1675 ntBASIC13.05□□□□□ -0.32
COL8A2P25067 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 FER1L4-210ENST00000615531 5998 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 ACKR1-201ENST00000368121 1240 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 AC005229.1-201ENST00000392885 409 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 RPS2P32-201ENST00000439199 892 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.04□□□□□ -0.32
COL8A2P25067 AC012441.1-201ENST00000446669 685 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.04□□□□□ -0.32
COL8A2P25067 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.04□□□□□ -0.32
COL8A2P25067 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 AP005482.1-201ENST00000563722 1273 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 AC133552.6-201ENST00000613406 534 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 COX11-210ENST00000639671 696 ntBASIC13.04□□□□□ -0.32
COL8A2P25067 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
COL8A2P25067 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
COL8A2P25067 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.04□□□□□ -0.32
COL8A2P25067 AC104640.1-201ENST00000562617 2109 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms