Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TSPY26P-202ENST00000565928 3884 ntBASIC16.84■□□□□ 0.29
RFX1P22670 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RFX1P22670 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFX1P22670 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RFX1P22670 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RFX1P22670 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
RFX1P22670 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RFX1P22670 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 MYCLP2-201ENST00000449268 967 ntBASIC16.83■□□□□ 0.28
RFX1P22670 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 AC092552.1-201ENST00000547243 906 ntBASIC16.83■□□□□ 0.28
RFX1P22670 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 AP005482.1-201ENST00000563722 1273 ntBASIC16.83■□□□□ 0.28
RFX1P22670 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.83■□□□□ 0.28
RFX1P22670 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 AL645728.2-202ENST00000641679 227 ntBASIC16.83■□□□□ 0.28
RFX1P22670 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RFX1P22670 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX1P22670 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX1P22670 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.82■□□□□ 0.28
RFX1P22670 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.82■□□□□ 0.28
RFX1P22670 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.82■□□□□ 0.28
RFX1P22670 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RFX1P22670 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 SLC7A15P-201ENST00000424028 1363 ntBASIC16.82■□□□□ 0.28
RFX1P22670 WASH3P-207ENST00000560956 1394 ntBASIC16.82■□□□□ 0.28
RFX1P22670 TNRC18P2-201ENST00000417666 2714 ntBASIC16.82■□□□□ 0.28
RFX1P22670 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RFX1P22670 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 MEP1AP4-201ENST00000423244 1087 ntBASIC16.82■□□□□ 0.28
RFX1P22670 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RFX1P22670 GHSR-202ENST00000427970 912 ntBASIC16.82■□□□□ 0.28
RFX1P22670 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.82■□□□□ 0.28
RFX1P22670 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFX1P22670 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.82■□□□□ 0.28
RFX1P22670 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 ZNF890P-202ENST00000530367 1156 ntBASIC16.82■□□□□ 0.28
RFX1P22670 RN7SL219P-201ENST00000582872 296 ntBASIC16.82■□□□□ 0.28
RFX1P22670 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.82■□□□□ 0.28
RFX1P22670 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RFX1P22670 AL512343.1-201ENST00000605837 169 ntBASIC16.82■□□□□ 0.28
RFX1P22670 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.82■□□□□ 0.28
RFX1P22670 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.82■□□□□ 0.28
RFX1P22670 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RFX1P22670 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RFX1P22670 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX1P22670 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX1P22670 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.81■□□□□ 0.28
RFX1P22670 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX1P22670 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFX1P22670 AL133338.1-201ENST00000565695 1517 ntBASIC16.81■□□□□ 0.28
RFX1P22670 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms