Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SCG2P13521 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 WASH3P-207ENST00000560956 1394 ntBASIC17.72■□□□□ 0.43
SCG2P13521 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SCG2P13521 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.72■□□□□ 0.43
SCG2P13521 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.72■□□□□ 0.43
SCG2P13521 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 AP001582.1-201ENST00000525856 295 ntBASIC17.72■□□□□ 0.43
SCG2P13521 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.72■□□□□ 0.43
SCG2P13521 BX539320.1-201ENST00000623759 877 ntBASIC17.72■□□□□ 0.43
SCG2P13521 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 AL359258.3-201ENST00000622910 2331 ntBASIC17.72■□□□□ 0.43
SCG2P13521 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.72■□□□□ 0.43
SCG2P13521 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 AL158070.2-201ENST00000623713 1621 ntBASIC17.72■□□□□ 0.43
SCG2P13521 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SCG2P13521 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.72■□□□□ 0.43
SCG2P13521 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.72■□□□□ 0.43
SCG2P13521 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCG2P13521 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG2P13521 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG2P13521 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG2P13521 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SCG2P13521 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.71■□□□□ 0.43
SCG2P13521 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.71■□□□□ 0.43
SCG2P13521 CLUHP6-201ENST00000580789 941 ntBASIC17.71■□□□□ 0.43
SCG2P13521 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG2P13521 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.71■□□□□ 0.43
SCG2P13521 RPSAP52-203ENST00000622976 1023 ntBASIC17.71■□□□□ 0.43
SCG2P13521 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG2P13521 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.71■□□□□ 0.43
SCG2P13521 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.71■□□□□ 0.43
SCG2P13521 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCG2P13521 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.71■□□□□ 0.43
SCG2P13521 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.71■□□□□ 0.42
SCG2P13521 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SCG2P13521 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCG2P13521 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCG2P13521 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SCG2P13521 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.71■□□□□ 0.42
SCG2P13521 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 FER1L4-210ENST00000615531 5998 ntBASIC17.7■□□□□ 0.42
SCG2P13521 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCG2P13521 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCG2P13521 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SCG2P13521 AL645937.2-201ENST00000396808 931 ntBASIC17.7■□□□□ 0.42
SCG2P13521 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 RN7SL752P-201ENST00000463779 287 ntBASIC17.7■□□□□ 0.42
SCG2P13521 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCG2P13521 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SCG2P13521 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.7■□□□□ 0.42
SCG2P13521 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.7■□□□□ 0.42
SCG2P13521 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms