Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA1P02708 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHRNA1P02708 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA1P02708 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CHRNA1P02708 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHRNA1P02708 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA1P02708 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.63■□□□□ 0.25
CHRNA1P02708 AC016700.1-201ENST00000429424 312 ntBASIC16.63■□□□□ 0.25
CHRNA1P02708 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.63■□□□□ 0.25
CHRNA1P02708 FTLP10-202ENST00000505798 471 ntBASIC16.63■□□□□ 0.25
CHRNA1P02708 AC026434.2-201ENST00000506094 1078 ntBASIC16.63■□□□□ 0.25
CHRNA1P02708 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.63■□□□□ 0.25
CHRNA1P02708 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA1P02708 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHRNA1P02708 AL360270.3-201ENST00000609118 1348 ntBASIC16.63■□□□□ 0.25
CHRNA1P02708 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA1P02708 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHRNA1P02708 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA1P02708 AC008894.3-201ENST00000624324 3103 ntBASIC16.63■□□□□ 0.25
CHRNA1P02708 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA1P02708 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA1P02708 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA1P02708 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA1P02708 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.62■□□□□ 0.25
CHRNA1P02708 SERPINA13P-202ENST00000478994 924 ntBASIC16.62■□□□□ 0.25
CHRNA1P02708 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CHRNA1P02708 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA1P02708 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.62■□□□□ 0.25
CHRNA1P02708 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.62■□□□□ 0.25
CHRNA1P02708 NDUFV2P1-201ENST00000596415 907 ntBASIC16.62■□□□□ 0.25
CHRNA1P02708 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA1P02708 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.62■□□□□ 0.25
CHRNA1P02708 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 CICP11-201ENST00000434745 2827 ntBASIC16.62■□□□□ 0.25
CHRNA1P02708 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA1P02708 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA1P02708 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA1P02708 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA1P02708 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA1P02708 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.61■□□□□ 0.25
CHRNA1P02708 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA1P02708 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHRNA1P02708 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
CHRNA1P02708 AL136309.1-201ENST00000403917 691 ntBASIC16.61■□□□□ 0.25
CHRNA1P02708 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA1P02708 AL354877.1-201ENST00000424412 413 ntBASIC16.61■□□□□ 0.25
CHRNA1P02708 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA1P02708 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.61■□□□□ 0.25
CHRNA1P02708 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.61■□□□□ 0.25
CHRNA1P02708 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRNA1P02708 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRNA1P02708 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA1P02708 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CHRNA1P02708 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHRNA1P02708 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRNA1P02708 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA1P02708 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms