Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CD4P01730 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CD4P01730 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 TUBBP5-203ENST00000508529 1334 ntBASIC16.95■□□□□ 0.3
CD4P01730 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CD4P01730 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CD4P01730 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CD4P01730 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.94■□□□□ 0.3
CD4P01730 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 AL391005.1-201ENST00000623953 2435 ntBASIC16.94■□□□□ 0.3
CD4P01730 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CD4P01730 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 MIR769-201ENST00000390225 118 ntBASIC16.94■□□□□ 0.3
CD4P01730 TMEM198B-204ENST00000484016 896 ntBASIC16.94■□□□□ 0.3
CD4P01730 RN7SL720P-201ENST00000488178 304 ntBASIC16.94■□□□□ 0.3
CD4P01730 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 AC245884.6-201ENST00000515672 1067 ntBASIC16.94■□□□□ 0.3
CD4P01730 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.94■□□□□ 0.3
CD4P01730 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.94■□□□□ 0.3
CD4P01730 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.94■□□□□ 0.3
CD4P01730 PPY2P-201ENST00000582808 702 ntBASIC16.94■□□□□ 0.3
CD4P01730 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CD4P01730 CU633904.3-201ENST00000624042 1029 ntBASIC16.94■□□□□ 0.3
CD4P01730 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 LRRC59-203ENST00000576448 1531 ntBASIC16.94■□□□□ 0.3
CD4P01730 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CD4P01730 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.94■□□□□ 0.3
CD4P01730 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD4P01730 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CD4P01730 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.94■□□□□ 0.3
CD4P01730 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CD4P01730 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.93■□□□□ 0.3
CD4P01730 AC018695.7-201ENST00000624587 2492 ntBASIC16.93■□□□□ 0.3
CD4P01730 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
CD4P01730 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.93■□□□□ 0.3
CD4P01730 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.93■□□□□ 0.3
CD4P01730 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 AL645937.2-201ENST00000396808 931 ntBASIC16.93■□□□□ 0.3
CD4P01730 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.93■□□□□ 0.3
CD4P01730 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.93■□□□□ 0.3
CD4P01730 RPS2P36-201ENST00000456516 831 ntBASIC16.93■□□□□ 0.3
CD4P01730 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.93■□□□□ 0.3
CD4P01730 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.93■□□□□ 0.3
CD4P01730 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.93■□□□□ 0.3
CD4P01730 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CD4P01730 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.93■□□□□ 0.3
CD4P01730 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.93■□□□□ 0.3
CD4P01730 RN7SL713P-201ENST00000582127 302 ntBASIC16.93■□□□□ 0.3
CD4P01730 SPCS2P2-201ENST00000603270 608 ntBASIC16.93■□□□□ 0.3
CD4P01730 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.93■□□□□ 0.3
CD4P01730 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CD4P01730 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CD4P01730 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CD4P01730 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.93■□□□□ 0.3
CD4P01730 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD4P01730 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.93■□□□□ 0.3
CD4P01730 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.92■□□□□ 0.3
CD4P01730 AC026691.1-201ENST00000602502 2017 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms