Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.29□□□□□ -0.44
IFNA1P01562 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
IFNA1P01562 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
IFNA1P01562 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
IFNA1P01562 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
IFNA1P01562 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 MTHFR-210ENST00000641407 2387 ntBASIC12.28□□□□□ -0.44
IFNA1P01562 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.28□□□□□ -0.44
IFNA1P01562 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.28□□□□□ -0.44
IFNA1P01562 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.28□□□□□ -0.44
IFNA1P01562 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 AC117947.1-201ENST00000427448 529 ntBASIC12.28□□□□□ -0.44
IFNA1P01562 CHCHD2P8-201ENST00000429873 447 ntBASIC12.28□□□□□ -0.44
IFNA1P01562 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.28□□□□□ -0.44
IFNA1P01562 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.28□□□□□ -0.44
IFNA1P01562 MIR3909-201ENST00000579518 119 ntBASIC12.28□□□□□ -0.44
IFNA1P01562 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
IFNA1P01562 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 AC083849.1-201ENST00000615227 514 ntBASIC12.28□□□□□ -0.44
IFNA1P01562 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 AC233702.3-201ENST00000578656 1387 ntBASIC12.28□□□□□ -0.44
IFNA1P01562 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.28□□□□□ -0.44
IFNA1P01562 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
IFNA1P01562 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
IFNA1P01562 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
IFNA1P01562 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.27□□□□□ -0.44
IFNA1P01562 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
IFNA1P01562 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
IFNA1P01562 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
IFNA1P01562 NSUN5P1-202ENST00000421140 1535 ntBASIC12.27□□□□□ -0.44
IFNA1P01562 NSUN5P2-203ENST00000457352 1529 ntBASIC12.27□□□□□ -0.44
IFNA1P01562 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
IFNA1P01562 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
IFNA1P01562 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
IFNA1P01562 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.27□□□□□ -0.44
IFNA1P01562 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
IFNA1P01562 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
IFNA1P01562 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.27□□□□□ -0.45
IFNA1P01562 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
IFNA1P01562 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms