Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-2O95096 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.23□□□□□ -0.13
NKX2-2O95096 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX2-2O95096 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 NORAD-201ENST00000565493 5339 ntBASIC14.22□□□□□ -0.13
NKX2-2O95096 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NKX2-2O95096 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NKX2-2O95096 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 AL645937.2-201ENST00000396808 931 ntBASIC14.22□□□□□ -0.13
NKX2-2O95096 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC134915.1-201ENST00000426461 574 ntBASIC14.22□□□□□ -0.13
NKX2-2O95096 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.22□□□□□ -0.13
NKX2-2O95096 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NKX2-2O95096 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC092552.1-201ENST00000547243 906 ntBASIC14.22□□□□□ -0.13
NKX2-2O95096 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC120045.2-201ENST00000567334 178 ntBASIC14.22□□□□□ -0.13
NKX2-2O95096 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.22□□□□□ -0.13
NKX2-2O95096 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.22□□□□□ -0.13
NKX2-2O95096 TMEM261P1-201ENST00000604899 340 ntBASIC14.22□□□□□ -0.13
NKX2-2O95096 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NKX2-2O95096 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
NKX2-2O95096 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.22□□□□□ -0.13
NKX2-2O95096 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
NKX2-2O95096 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NKX2-2O95096 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NKX2-2O95096 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX2-2O95096 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 AL360270.3-201ENST00000609118 1348 ntBASIC14.21□□□□□ -0.13
NKX2-2O95096 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX2-2O95096 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
NKX2-2O95096 LINC01101-201ENST00000622953 1884 ntBASIC14.21□□□□□ -0.13
NKX2-2O95096 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NKX2-2O95096 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.21□□□□□ -0.13
NKX2-2O95096 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX2-2O95096 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
NKX2-2O95096 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX2-2O95096 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 AC236430.1-201ENST00000402231 743 ntBASIC14.21□□□□□ -0.13
NKX2-2O95096 AC098850.1-201ENST00000419919 790 ntBASIC14.21□□□□□ -0.13
NKX2-2O95096 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.21□□□□□ -0.13
NKX2-2O95096 API5-211ENST00000534695 560 ntTSL 5 BASIC14.21□□□□□ -0.13
NKX2-2O95096 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX2-2O95096 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.21□□□□□ -0.13
NKX2-2O95096 MIR4745-201ENST00000577608 62 ntBASIC14.21□□□□□ -0.13
NKX2-2O95096 CHCHD2P3-201ENST00000603038 451 ntBASIC14.21□□□□□ -0.13
NKX2-2O95096 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.21□□□□□ -0.13
NKX2-2O95096 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX2-2O95096 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms