Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 ACTBP8-201ENST00000403258 1108 ntBASIC16.13■□□□□ 0.17
BEST1O76090 NUS1P3-201ENST00000423502 862 ntBASIC16.13■□□□□ 0.17
BEST1O76090 AC022210.1-201ENST00000449856 793 ntBASIC16.13■□□□□ 0.17
BEST1O76090 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
BEST1O76090 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
BEST1O76090 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
BEST1O76090 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
BEST1O76090 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
BEST1O76090 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BEST1O76090 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.12■□□□□ 0.17
BEST1O76090 AL138709.1-201ENST00000614840 1693 ntBASIC16.12■□□□□ 0.17
BEST1O76090 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BEST1O76090 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
BEST1O76090 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.12■□□□□ 0.17
BEST1O76090 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
BEST1O76090 AL645937.2-201ENST00000396808 931 ntBASIC16.12■□□□□ 0.17
BEST1O76090 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BEST1O76090 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 ATP5G2P4-201ENST00000442175 420 ntBASIC16.12■□□□□ 0.17
BEST1O76090 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.12■□□□□ 0.17
BEST1O76090 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.12■□□□□ 0.17
BEST1O76090 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 KRT18P25-201ENST00000508931 1278 ntBASIC16.12■□□□□ 0.17
BEST1O76090 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.12■□□□□ 0.17
BEST1O76090 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.12■□□□□ 0.17
BEST1O76090 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.12■□□□□ 0.17
BEST1O76090 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BEST1O76090 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
BEST1O76090 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 AL360270.3-201ENST00000609118 1348 ntBASIC16.12■□□□□ 0.17
BEST1O76090 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 REXO1L2P-201ENST00000425429 2069 ntBASIC16.12■□□□□ 0.17
BEST1O76090 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST1O76090 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST1O76090 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.11■□□□□ 0.17
BEST1O76090 KRT8P14-201ENST00000414254 1442 ntBASIC16.11■□□□□ 0.17
BEST1O76090 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.11■□□□□ 0.17
BEST1O76090 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BEST1O76090 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
BEST1O76090 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST1O76090 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms