Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.13□□□□□ -0.15
CLPXO76031 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.13□□□□□ -0.15
CLPXO76031 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.13□□□□□ -0.15
CLPXO76031 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.13□□□□□ -0.15
CLPXO76031 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 AP001267.2-201ENST00000532619 2086 ntBASIC14.13□□□□□ -0.15
CLPXO76031 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLPXO76031 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.13□□□□□ -0.15
CLPXO76031 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPXO76031 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLPXO76031 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPXO76031 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPXO76031 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLPXO76031 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLPXO76031 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPXO76031 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPXO76031 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.12□□□□□ -0.15
CLPXO76031 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLPXO76031 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.12□□□□□ -0.15
CLPXO76031 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.12□□□□□ -0.15
CLPXO76031 AC245100.5-201ENST00000452108 331 ntBASIC14.12□□□□□ -0.15
CLPXO76031 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 OR7E14P-202ENST00000530490 1290 ntBASIC14.12□□□□□ -0.15
CLPXO76031 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPXO76031 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.12□□□□□ -0.15
CLPXO76031 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPXO76031 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPXO76031 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.12□□□□□ -0.15
CLPXO76031 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLPXO76031 AC107918.4-202ENST00000641623 219 ntBASIC14.12□□□□□ -0.15
CLPXO76031 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.12□□□□□ -0.15
CLPXO76031 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLPXO76031 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.12□□□□□ -0.15
CLPXO76031 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPXO76031 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 AC118758.2-201ENST00000614242 2813 ntBASIC14.11□□□□□ -0.15
CLPXO76031 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CLPXO76031 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 RPS2P1-201ENST00000434010 821 ntBASIC14.11□□□□□ -0.15
CLPXO76031 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 NUTM2HP-201ENST00000442076 2498 ntBASIC14.11□□□□□ -0.15
CLPXO76031 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 POLD2P1-201ENST00000511220 997 ntBASIC14.11□□□□□ -0.15
CLPXO76031 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 AC092865.5-201ENST00000545435 363 ntBASIC14.11□□□□□ -0.15
CLPXO76031 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 AL049840.3-201ENST00000602669 611 ntBASIC14.11□□□□□ -0.15
CLPXO76031 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.11□□□□□ -0.15
CLPXO76031 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms