Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAF3IP2O43734 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAF3IP2O43734 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.77□□□□□ -0.2
TRAF3IP2O43734 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.77□□□□□ -0.2
TRAF3IP2O43734 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAF3IP2O43734 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAF3IP2O43734 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 SLC7A15P-201ENST00000424028 1363 ntBASIC13.77□□□□□ -0.21
TRAF3IP2O43734 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 FAM207CP-201ENST00000443486 507 ntBASIC13.77□□□□□ -0.21
TRAF3IP2O43734 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 GAPDHP40-201ENST00000505218 1006 ntBASIC13.77□□□□□ -0.21
TRAF3IP2O43734 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.77□□□□□ -0.21
TRAF3IP2O43734 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAF3IP2O43734 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 DFFBP1-201ENST00000433250 979 ntBASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAF3IP2O43734 AL049840.4-201ENST00000602422 811 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms