Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX1O00570 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SOX1O00570 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.14■□□□□ 0.17
SOX1O00570 MIR6125-201ENST00000618986 96 ntBASIC16.14■□□□□ 0.17
SOX1O00570 AC002472.3-201ENST00000640124 621 ntBASIC16.14■□□□□ 0.17
SOX1O00570 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX1O00570 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX1O00570 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX1O00570 AC244394.1-201ENST00000435000 1665 ntBASIC16.14■□□□□ 0.17
SOX1O00570 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX1O00570 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.14■□□□□ 0.17
SOX1O00570 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SOX1O00570 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX1O00570 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX1O00570 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX1O00570 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX1O00570 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 LTB4R2-202ENST00000528054 3092 ntBASIC16.13■□□□□ 0.17
SOX1O00570 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SOX1O00570 AL645937.2-201ENST00000396808 931 ntBASIC16.13■□□□□ 0.17
SOX1O00570 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 AC010141.1-201ENST00000411585 623 ntBASIC16.13■□□□□ 0.17
SOX1O00570 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.13■□□□□ 0.17
SOX1O00570 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SOX1O00570 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX1O00570 AC005962.1-201ENST00000584100 773 ntBASIC16.13■□□□□ 0.17
SOX1O00570 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.13■□□□□ 0.17
SOX1O00570 AC007326.1-201ENST00000604539 458 ntBASIC16.13■□□□□ 0.17
SOX1O00570 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SOX1O00570 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SOX1O00570 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SOX1O00570 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX1O00570 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.13■□□□□ 0.17
SOX1O00570 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SOX1O00570 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX1O00570 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX1O00570 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX1O00570 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SOX1O00570 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SOX1O00570 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX1O00570 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SOX1O00570 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SOX1O00570 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX1O00570 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX1O00570 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX1O00570 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX1O00570 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX1O00570 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX1O00570 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX1O00570 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX1O00570 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.12■□□□□ 0.17
SOX1O00570 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX1O00570 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX1O00570 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX1O00570 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX1O00570 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX1O00570 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX1O00570 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SOX1O00570 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX1O00570 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SOX1O00570 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SOX1O00570 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX1O00570 AC055811.4-201ENST00000624039 1754 ntBASIC16.11■□□□□ 0.17
SOX1O00570 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SOX1O00570 AC009093.2-202ENST00000620513 2079 ntBASIC16.11■□□□□ 0.17
SOX1O00570 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX1O00570 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SOX1O00570 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms