Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 AC055876.3-201ENST00000431496 288 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 MTND6P24-201ENST00000440466 518 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC092364.2-202ENST00000597012 1073 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 AC138649.4-201ENST00000612222 287 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
NACAE9PAV3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 INTS4P1-203ENST00000641008 3683 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC117489.1-201ENST00000625169 3217 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC020658.6-201ENST00000623564 1870 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 KLF2P3-201ENST00000451977 1087 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.4□□□□□ -0.58
NACAE9PAV3 ALG1L8P-201ENST00000533887 760 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 LINC01225-203ENST00000563550 1244 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC138761.1-201ENST00000584393 385 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AL390754.1-201ENST00000619088 582 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AC138035.3-201ENST00000622706 2791 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NACAE9PAV3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.4□□□□□ -0.58
NACAE9PAV3 AL691432.1-201ENST00000596308 1422 ntBASIC11.4□□□□□ -0.58
NACAE9PAV3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
NACAE9PAV3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NACAE9PAV3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.4□□□□□ -0.59
NACAE9PAV3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
NACAE9PAV3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
NACAE9PAV3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.39□□□□□ -0.59
NACAE9PAV3 AC004899.2-201ENST00000622993 3860 ntBASIC11.39□□□□□ -0.59
NACAE9PAV3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 SPDYE7P-202ENST00000420373 878 ntBASIC11.39□□□□□ -0.59
NACAE9PAV3 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.39□□□□□ -0.59
NACAE9PAV3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.39□□□□□ -0.59
NACAE9PAV3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.39□□□□□ -0.59
NACAE9PAV3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.39□□□□□ -0.59
NACAE9PAV3 AC026150.2-201ENST00000564693 1156 ntBASIC11.39□□□□□ -0.59
NACAE9PAV3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.39□□□□□ -0.59
NACAE9PAV3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.39□□□□□ -0.59
NACAE9PAV3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NACAE9PAV3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms