Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
HFM1A2PYH4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HFM1A2PYH4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
HFM1A2PYH4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 AC079178.1-201ENST00000420915 656 ntBASIC22.46■■□□□ 1.19
HFM1A2PYH4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 MIR4783-201ENST00000580343 82 ntBASIC22.46■■□□□ 1.19
HFM1A2PYH4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HFM1A2PYH4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HFM1A2PYH4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
HFM1A2PYH4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
HFM1A2PYH4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
HFM1A2PYH4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC22.45■■□□□ 1.19
HFM1A2PYH4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
HFM1A2PYH4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 AC023157.3-201ENST00000619086 2088 ntBASIC22.45■■□□□ 1.18
HFM1A2PYH4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC22.45■■□□□ 1.18
HFM1A2PYH4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC22.45■■□□□ 1.18
HFM1A2PYH4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC22.45■■□□□ 1.18
HFM1A2PYH4 HOMER2P2-201ENST00000451621 847 ntBASIC22.45■■□□□ 1.18
HFM1A2PYH4 AL358472.3-201ENST00000608147 415 ntBASIC22.45■■□□□ 1.18
HFM1A2PYH4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC22.45■■□□□ 1.18
HFM1A2PYH4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HFM1A2PYH4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.45■■□□□ 1.18
HFM1A2PYH4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
HFM1A2PYH4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HFM1A2PYH4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
HFM1A2PYH4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
HFM1A2PYH4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AC015818.8-201ENST00000587907 1519 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 ALG3P1-201ENST00000508806 1114 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AC131206.1-201ENST00000538078 1211 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms