Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC009779.1-201ENST00000551138 283 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC007787.1-201ENST00000588095 1583 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 AC009955.4-201ENST00000597192 544 ntBASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.49■□□□□ 0.55
ZC3H4Q9UPT8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 AC004066.1-201ENST00000502488 802 ntBASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 AC138466.3-201ENST00000619983 221 ntBASIC18.48■□□□□ 0.55
ZC3H4Q9UPT8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AC026691.1-201ENST00000602502 2017 ntBASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AC022616.1-201ENST00000518688 554 ntBASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 AP001527.2-201ENST00000614441 631 ntBASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZC3H4Q9UPT8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZC3H4Q9UPT8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms