Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 AC234782.1-201ENST00000451950 919 ntBASIC19.37■□□□□ 0.69
SCN11AQ9UI33 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.37■□□□□ 0.69
SCN11AQ9UI33 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 AC131206.1-201ENST00000538078 1211 ntBASIC19.37■□□□□ 0.69
SCN11AQ9UI33 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN11AQ9UI33 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 FTLP1-201ENST00000449155 526 ntBASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AC073150.1-201ENST00000450406 1084 ntBASIC19.36■□□□□ 0.69
SCN11AQ9UI33 RPL18P13-201ENST00000478088 569 ntBASIC19.36■□□□□ 0.69
SCN11AQ9UI33 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 SNORD3B-2-202ENST00000571722 791 ntBASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 CYP4F23P-201ENST00000593402 1579 ntBASIC19.36■□□□□ 0.69
SCN11AQ9UI33 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN11AQ9UI33 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 ZBED1P1-201ENST00000502364 1930 ntBASIC19.35■□□□□ 0.69
SCN11AQ9UI33 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 ELK2AP-201ENST00000392510 1007 ntBASIC19.35■□□□□ 0.69
SCN11AQ9UI33 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 AC011742.3-201ENST00000439053 820 ntBASIC19.35■□□□□ 0.69
SCN11AQ9UI33 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 CU633904.3-201ENST00000624042 1029 ntBASIC19.35■□□□□ 0.69
SCN11AQ9UI33 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN11AQ9UI33 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms