Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BLOC1S4Q9NUP1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 REXO1L5P-201ENST00000622260 2098 ntBASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 C1QBPP1-201ENST00000400117 770 ntBASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 AC140912.1-201ENST00000577171 1054 ntBASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 WFDC1-204ENST00000613603 549 ntBASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 PRSS30P-206ENST00000641773 873 ntBASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BLOC1S4Q9NUP1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 AC011270.2-201ENST00000624293 2550 ntBASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 CICP23-201ENST00000605013 2741 ntBASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 DGCR5-201ENST00000399539 862 ntBASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 CRB3P1-201ENST00000449338 276 ntBASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 AC013726.1-201ENST00000563747 2285 ntBASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.1■□□□□ 0.33
BLOC1S4Q9NUP1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BLOC1S4Q9NUP1 TSPY26P-202ENST00000565928 3884 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms