Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 SOCS2P1-201ENST00000417727 557 ntBASIC16.44■□□□□ 0.22
CISHQ9NSE2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 AP000845.1-201ENST00000581677 2131 ntBASIC16.44■□□□□ 0.22
CISHQ9NSE2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 AC025048.6-201ENST00000634326 1161 ntBASIC16.44■□□□□ 0.22
CISHQ9NSE2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.44■□□□□ 0.22
CISHQ9NSE2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 AC093525.8-201ENST00000624099 1342 ntBASIC16.44■□□□□ 0.22
CISHQ9NSE2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CISHQ9NSE2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 TCAF2P1-201ENST00000291129 2421 ntBASIC16.43■□□□□ 0.22
CISHQ9NSE2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 AP002414.2-201ENST00000591780 3365 ntBASIC16.43■□□□□ 0.22
CISHQ9NSE2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CISHQ9NSE2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CISHQ9NSE2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AGAP7P-201ENST00000582299 2062 ntBASIC16.42■□□□□ 0.22
CISHQ9NSE2 AGAP14-201ENST00000624701 2060 ntBASIC16.42■□□□□ 0.22
CISHQ9NSE2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 AC012508.2-201ENST00000567613 1472 ntBASIC16.42■□□□□ 0.22
CISHQ9NSE2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.42■□□□□ 0.22
CISHQ9NSE2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 WASH3P-207ENST00000560956 1394 ntBASIC16.42■□□□□ 0.22
CISHQ9NSE2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CISHQ9NSE2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.42■□□□□ 0.22
CISHQ9NSE2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms