Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 AC010327.5-201ENST00000586923 3061 ntBASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SND1-IT1Q9HBX3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 GPX1P2-201ENST00000429271 606 ntBASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms