Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AL139094.1-201ENST00000405549 1188 ntBASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AC078819.1-201ENST00000547454 765 ntBASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AC012085.1-201ENST00000548270 765 ntBASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 LRRC59-203ENST00000576448 1531 ntBASIC17.96■□□□□ 0.47
SH2D4AQ9H788 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH2D4AQ9H788 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SH2D4AQ9H788 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 MIR4538-201ENST00000581377 78 ntBASIC17.95■□□□□ 0.46
SH2D4AQ9H788 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.95■□□□□ 0.46
SH2D4AQ9H788 MIR6869-201ENST00000619434 62 ntBASIC17.95■□□□□ 0.46
SH2D4AQ9H788 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 AC007787.1-201ENST00000588095 1583 ntBASIC17.95■□□□□ 0.46
SH2D4AQ9H788 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH2D4AQ9H788 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 RN7SL560P-201ENST00000577943 264 ntBASIC17.94■□□□□ 0.46
SH2D4AQ9H788 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SH2D4AQ9H788 AC009542.2-202ENST00000619004 1067 ntBASIC17.94■□□□□ 0.46
SH2D4AQ9H788 AC006453.4-201ENST00000636949 1252 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms