Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNASEH2CP1-201ENST00000454281 502 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AC131206.1-201ENST00000538078 1211 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 AP001002.2-201ENST00000625137 386 ntBASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.19■□□□□ 0.02
COL25A1Q9BXS0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 AC006122.1-201ENST00000493323 440 ntBASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 OR5BD1P-201ENST00000532527 817 ntBASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 AC091304.3-201ENST00000566500 716 ntBASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 Z82244.2-201ENST00000632196 448 ntBASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL25A1Q9BXS0 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 INE2-201ENST00000630399 1874 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC144522.1-201ENST00000625111 1658 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 CDKN2A-AS1-201ENST00000441769 823 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC098934.1-203ENST00000442868 1262 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC009517.1-201ENST00000454750 570 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC022447.5-201ENST00000504817 392 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC120498.7-201ENST00000562876 330 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 RN7SL300P-201ENST00000582522 318 ntBASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC15.17■□□□□ 0.02
COL25A1Q9BXS0 AC133540.1-201ENST00000620845 1019 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms