Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AP000356.3-201ENST00000382243 753 ntBASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AC009779.1-201ENST00000551138 283 ntBASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AL023803.2-201ENST00000620080 638 ntBASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AL158070.2-201ENST00000623713 1621 ntBASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 AC130709.1-201ENST00000484779 1212 ntBASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.89□□□□□ -0.35
CSMD1Q96PZ7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 MIR557-201ENST00000385239 98 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 ACTBP8-201ENST00000403258 1108 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 AL391280.1-201ENST00000506969 1062 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 AC097359.3-201ENST00000603982 1210 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 CTSL-202ENST00000342020 933 ntTSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 POM121L8P-201ENST00000417732 1281 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 POM121L9P-203ENST00000441984 1285 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 NAP1L6-202ENST00000641404 1222 ntBASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CSMD1Q96PZ7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AQP7P5-201ENST00000428759 1049 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AQP7P4-201ENST00000447083 1042 ntBASIC12.87□□□□□ -0.35
CSMD1Q96PZ7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms