Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIPA1Q96FS4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 MIR326-201ENST00000362220 95 ntBASIC15.48■□□□□ 0.07
SIPA1Q96FS4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 MIR1202-201ENST00000408529 83 ntBASIC15.48■□□□□ 0.07
SIPA1Q96FS4 Z93015.1-201ENST00000451718 390 ntBASIC15.48■□□□□ 0.07
SIPA1Q96FS4 AL590640.2-201ENST00000457038 527 ntBASIC15.48■□□□□ 0.07
SIPA1Q96FS4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 FAM86HP-204ENST00000513466 959 ntBASIC15.48■□□□□ 0.07
SIPA1Q96FS4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 AC006453.4-201ENST00000636949 1252 ntBASIC15.48■□□□□ 0.07
SIPA1Q96FS4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIPA1Q96FS4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AC112504.1-201ENST00000623415 1841 ntBASIC15.47■□□□□ 0.07
SIPA1Q96FS4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AC006449.5-201ENST00000610658 2098 ntBASIC15.47■□□□□ 0.07
SIPA1Q96FS4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 TPM3P8-201ENST00000330554 643 ntBASIC15.47■□□□□ 0.07
SIPA1Q96FS4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 CD8B2-202ENST00000417670 633 ntBASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AC004066.1-201ENST00000502488 802 ntBASIC15.47■□□□□ 0.07
SIPA1Q96FS4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.47■□□□□ 0.07
SIPA1Q96FS4 LRRC59-203ENST00000576448 1531 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms