Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 ISCA2P1-201ENST00000425548 448 ntBASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 FAM58BP-201ENST00000439056 645 ntBASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 VDAC1P1-201ENST00000439229 848 ntBASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 RN7SL555P-201ENST00000584742 339 ntBASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AC104784.1-201ENST00000473096 294 ntBASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AC116345.2-201ENST00000512837 523 ntBASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AC242376.1-201ENST00000559033 726 ntBASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AC012044.1-201ENST00000603431 297 ntBASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 AP003419.4-201ENST00000616071 517 ntBASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
KLHDC9Q8NEP7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.77■□□□□ 0.27
KLHDC9Q8NEP7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 AC019193.1-201ENST00000506678 823 ntBASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 RTN3P1-201ENST00000536295 711 ntBASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 AC009779.1-201ENST00000551138 283 ntBASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KLHDC9Q8NEP7 AC073352.2-201ENST00000609385 439 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms