Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 AC023157.3-201ENST00000619086 2088 ntBASIC23.78■■□□□ 1.4
VPS8Q8N3P4 AC003102.2-201ENST00000589195 1469 ntBASIC23.78■■□□□ 1.4
VPS8Q8N3P4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 AC023310.1-201ENST00000554836 735 ntBASIC23.78■■□□□ 1.4
VPS8Q8N3P4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VPS8Q8N3P4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC23.78■■□□□ 1.4
VPS8Q8N3P4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 AL023775.1-201ENST00000454907 1746 ntBASIC23.77■■□□□ 1.4
VPS8Q8N3P4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 RPL13AP20-201ENST00000459725 609 ntBASIC23.77■■□□□ 1.4
VPS8Q8N3P4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 COX5BP1-201ENST00000507622 393 ntBASIC23.77■■□□□ 1.4
VPS8Q8N3P4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 AC009093.2-202ENST00000620513 2079 ntBASIC23.77■■□□□ 1.4
VPS8Q8N3P4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC23.77■■□□□ 1.4
VPS8Q8N3P4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.39
VPS8Q8N3P4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 AL136309.1-201ENST00000403917 691 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 PPY2P-201ENST00000582808 702 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 AC010328.2-201ENST00000597698 1111 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 LINC00528-201ENST00000600723 2160 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 AC004945.1-201ENST00000416738 983 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC23.76■■□□□ 1.39
VPS8Q8N3P4 MIR4741-201ENST00000579822 90 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 ZACNP1-201ENST00000612259 710 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 AC005695.3-201ENST00000614522 232 ntBASIC23.76■■□□□ 1.39
VPS8Q8N3P4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 AGAP7P-201ENST00000582299 2062 ntBASIC23.75■■□□□ 1.39
VPS8Q8N3P4 AGAP14-201ENST00000624701 2060 ntBASIC23.75■■□□□ 1.39
VPS8Q8N3P4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VPS8Q8N3P4 INE2-201ENST00000630399 1874 ntBASIC23.75■■□□□ 1.39
VPS8Q8N3P4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms