Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 KLF2P2-201ENST00000416807 1039 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 COX5BP8-201ENST00000416911 349 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 COX20P2-201ENST00000452636 358 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 RN7SL837P-201ENST00000463010 287 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 AC009486.1-201ENST00000569860 813 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 MIR5189-201ENST00000577370 114 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 LINC02084-201ENST00000606069 1096 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 AL603764.1-201ENST00000636452 321 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC27Q2M243 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 REXO1L5P-201ENST00000622260 2098 ntBASIC20.01■□□□□ 0.79
CCDC27Q2M243 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 POR-201ENST00000394893 2532 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC27Q2M243 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20■□□□□ 0.79
CCDC27Q2M243 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 AC105233.6-201ENST00000642093 218 ntBASIC20■□□□□ 0.79
CCDC27Q2M243 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CCDC27Q2M243 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CCDC27Q2M243 CU639417.3-201ENST00000624240 1404 ntBASIC20■□□□□ 0.79
CCDC27Q2M243 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC27Q2M243 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20■□□□□ 0.79
CCDC27Q2M243 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC27Q2M243 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 AC010319.3-201ENST00000597028 470 ntBASIC19.99■□□□□ 0.79
CCDC27Q2M243 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC27Q2M243 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC27Q2M243 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms