Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.9■□□□□ 0.62
DDR1Q08345 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
DDR1Q08345 MTHFR-217ENST00000641820 1569 ntBASIC18.89■□□□□ 0.62
DDR1Q08345 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
DDR1Q08345 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
DDR1Q08345 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.89■□□□□ 0.62
DDR1Q08345 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
DDR1Q08345 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DDR1Q08345 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
DDR1Q08345 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.89■□□□□ 0.61
DDR1Q08345 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.89■□□□□ 0.61
DDR1Q08345 RN7SL8P-201ENST00000461771 266 ntBASIC18.89■□□□□ 0.61
DDR1Q08345 AC138696.2-201ENST00000607376 223 ntBASIC18.89■□□□□ 0.61
DDR1Q08345 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
DDR1Q08345 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.89■□□□□ 0.61
DDR1Q08345 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 AL662844.4-201ENST00000606367 2838 ntBASIC18.89■□□□□ 0.61
DDR1Q08345 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.89■□□□□ 0.61
DDR1Q08345 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDR1Q08345 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.89■□□□□ 0.61
DDR1Q08345 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.88■□□□□ 0.61
DDR1Q08345 MBLAC2-202ENST00000514906 1936 ntBASIC18.88■□□□□ 0.61
DDR1Q08345 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
DDR1Q08345 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
DDR1Q08345 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 OR2K2-202ENST00000374428 1038 ntBASIC18.88■□□□□ 0.61
DDR1Q08345 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.88■□□□□ 0.61
DDR1Q08345 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.88■□□□□ 0.61
DDR1Q08345 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.88■□□□□ 0.61
DDR1Q08345 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.88■□□□□ 0.61
DDR1Q08345 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.88■□□□□ 0.61
DDR1Q08345 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.88■□□□□ 0.61
DDR1Q08345 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 AC011840.2-201ENST00000563063 1520 ntBASIC18.88■□□□□ 0.61
DDR1Q08345 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 AC020910.5-201ENST00000623668 1865 ntBASIC18.88■□□□□ 0.61
DDR1Q08345 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DDR1Q08345 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDR1Q08345 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.87■□□□□ 0.61
DDR1Q08345 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 FAM90A7P-201ENST00000382628 1395 ntBASIC18.87■□□□□ 0.61
DDR1Q08345 FAM90A23P-201ENST00000400136 1395 ntBASIC18.87■□□□□ 0.61
DDR1Q08345 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DDR1Q08345 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 RN7SL818P-201ENST00000485099 259 ntBASIC18.87■□□□□ 0.61
DDR1Q08345 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 AC008805.1-201ENST00000590892 364 ntBASIC18.87■□□□□ 0.61
DDR1Q08345 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 AC132192.2-201ENST00000596206 1147 ntBASIC18.87■□□□□ 0.61
DDR1Q08345 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 AC138894.2-201ENST00000602838 371 ntBASIC18.87■□□□□ 0.61
DDR1Q08345 RN7SL725P-201ENST00000606439 259 ntBASIC18.87■□□□□ 0.61
DDR1Q08345 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.87■□□□□ 0.61
DDR1Q08345 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
DDR1Q08345 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDR1Q08345 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDR1Q08345 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DDR1Q08345 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms