Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SKP1P63208 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.7□□□□□ -0.06
SKP1P63208 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.7□□□□□ -0.06
SKP1P63208 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.7□□□□□ -0.06
SKP1P63208 AC090616.6-203ENST00000579186 1945 ntBASIC14.7□□□□□ -0.06
SKP1P63208 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SKP1P63208 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.7□□□□□ -0.06
SKP1P63208 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SKP1P63208 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
SKP1P63208 COX20P2-201ENST00000452636 358 ntBASIC14.7□□□□□ -0.06
SKP1P63208 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.7□□□□□ -0.06
SKP1P63208 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.7□□□□□ -0.06
SKP1P63208 AC120045.2-201ENST00000567334 178 ntBASIC14.7□□□□□ -0.06
SKP1P63208 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.7□□□□□ -0.06
SKP1P63208 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 AC025048.6-201ENST00000634326 1161 ntBASIC14.7□□□□□ -0.06
SKP1P63208 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.7□□□□□ -0.06
SKP1P63208 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.7□□□□□ -0.06
SKP1P63208 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.7□□□□□ -0.06
SKP1P63208 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.7□□□□□ -0.06
SKP1P63208 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SKP1P63208 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SKP1P63208 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SKP1P63208 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 C1QBPP1-201ENST00000400117 770 ntBASIC14.69□□□□□ -0.06
SKP1P63208 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 NUS1P3-201ENST00000423502 862 ntBASIC14.69□□□□□ -0.06
SKP1P63208 VDAC1P7-201ENST00000462417 847 ntBASIC14.69□□□□□ -0.06
SKP1P63208 AC004066.1-201ENST00000502488 802 ntBASIC14.69□□□□□ -0.06
SKP1P63208 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.69□□□□□ -0.06
SKP1P63208 AC026410.3-201ENST00000514280 936 ntBASIC14.69□□□□□ -0.06
SKP1P63208 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.69□□□□□ -0.06
SKP1P63208 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.69□□□□□ -0.06
SKP1P63208 CHCHD2P3-201ENST00000603038 451 ntBASIC14.69□□□□□ -0.06
SKP1P63208 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms