Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDC42P60953 AC002056.1-201ENST00000395613 760 ntBASIC14.2□□□□□ -0.14
CDC42P60953 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.2□□□□□ -0.14
CDC42P60953 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.2□□□□□ -0.14
CDC42P60953 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.2□□□□□ -0.14
CDC42P60953 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.2□□□□□ -0.14
CDC42P60953 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.2□□□□□ -0.14
CDC42P60953 AL138918.1-201ENST00000568306 659 ntBASIC14.2□□□□□ -0.14
CDC42P60953 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.2□□□□□ -0.14
CDC42P60953 AL121912.1-201ENST00000603683 238 ntBASIC14.2□□□□□ -0.14
CDC42P60953 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 AC025580.3-201ENST00000617932 1424 ntBASIC14.2□□□□□ -0.14
CDC42P60953 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 BCAR1-209ENST00000546196 1340 ntBASIC14.19□□□□□ -0.14
CDC42P60953 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC42P60953 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.19□□□□□ -0.14
CDC42P60953 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.19□□□□□ -0.14
CDC42P60953 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.19□□□□□ -0.14
CDC42P60953 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.19□□□□□ -0.14
CDC42P60953 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 AC026979.3-201ENST00000607315 403 ntBASIC14.19□□□□□ -0.14
CDC42P60953 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC42P60953 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.19□□□□□ -0.14
CDC42P60953 AC012313.10-201ENST00000623509 926 ntBASIC14.19□□□□□ -0.14
CDC42P60953 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.19□□□□□ -0.14
CDC42P60953 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.19□□□□□ -0.14
CDC42P60953 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CDC42P60953 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42P60953 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
CDC42P60953 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC42P60953 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms