Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH12P55289 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.48□□□□□ -0.09
CDH12P55289 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH12P55289 AC093520.2-201ENST00000561830 333 ntBASIC14.48□□□□□ -0.09
CDH12P55289 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH12P55289 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDH12P55289 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH12P55289 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH12P55289 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDH12P55289 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH12P55289 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH12P55289 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH12P55289 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 INTS4P1-203ENST00000641008 3683 ntBASIC14.47□□□□□ -0.09
CDH12P55289 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH12P55289 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 AL627223.1-201ENST00000416693 442 ntBASIC14.47□□□□□ -0.09
CDH12P55289 AL353705.2-201ENST00000428243 662 ntBASIC14.47□□□□□ -0.09
CDH12P55289 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH12P55289 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH12P55289 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH12P55289 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH12P55289 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH12P55289 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH12P55289 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH12P55289 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH12P55289 AL607033.1-201ENST00000623900 1599 ntBASIC14.47□□□□□ -0.09
CDH12P55289 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH12P55289 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH12P55289 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH12P55289 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH12P55289 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH12P55289 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDH12P55289 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDH12P55289 CICP11-201ENST00000434745 2827 ntBASIC14.46□□□□□ -0.09
CDH12P55289 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH12P55289 AZGP1P1-201ENST00000411909 902 ntBASIC14.46□□□□□ -0.09
CDH12P55289 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH12P55289 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH12P55289 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH12P55289 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH12P55289 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH12P55289 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH12P55289 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH12P55289 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CDH12P55289 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH12P55289 AC018529.1-201ENST00000613063 361 ntBASIC14.46□□□□□ -0.09
CDH12P55289 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms