Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP6P55212 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP6P55212 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.96□□□□□ -0.17
CASP6P55212 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CASP6P55212 CICP14-201ENST00000629111 2732 ntBASIC13.96□□□□□ -0.18
CASP6P55212 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CASP6P55212 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CASP6P55212 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
CASP6P55212 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.96□□□□□ -0.18
CASP6P55212 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.96□□□□□ -0.18
CASP6P55212 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.96□□□□□ -0.18
CASP6P55212 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CASP6P55212 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP6P55212 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 RPL13AP20-201ENST00000459725 609 ntBASIC13.95□□□□□ -0.18
CASP6P55212 AC026410.3-201ENST00000514280 936 ntBASIC13.95□□□□□ -0.18
CASP6P55212 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 HNRNPUP1-201ENST00000554987 333 ntBASIC13.95□□□□□ -0.18
CASP6P55212 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 AC015910.1-201ENST00000579400 975 ntBASIC13.95□□□□□ -0.18
CASP6P55212 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.95□□□□□ -0.18
CASP6P55212 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 AP005019.2-201ENST00000615104 511 ntBASIC13.95□□□□□ -0.18
CASP6P55212 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.95□□□□□ -0.18
CASP6P55212 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP6P55212 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
CASP6P55212 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP6P55212 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CASP6P55212 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CASP6P55212 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CASP6P55212 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CASP6P55212 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.94□□□□□ -0.18
CASP6P55212 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 AC026954.1-201ENST00000429771 1293 ntBASIC13.94□□□□□ -0.18
CASP6P55212 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CASP6P55212 Z93015.1-201ENST00000451718 390 ntBASIC13.94□□□□□ -0.18
CASP6P55212 KRT8P13-201ENST00000463294 1010 ntBASIC13.94□□□□□ -0.18
CASP6P55212 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.94□□□□□ -0.18
CASP6P55212 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.94□□□□□ -0.18
CASP6P55212 AP001258.2-201ENST00000529891 490 ntBASIC13.94□□□□□ -0.18
CASP6P55212 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CASP6P55212 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CASP6P55212 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms