Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.15■□□□□ 0.5
MRE11P49959 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
MRE11P49959 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
MRE11P49959 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
MRE11P49959 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.15■□□□□ 0.5
MRE11P49959 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.15■□□□□ 0.5
MRE11P49959 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
MRE11P49959 AC092865.6-201ENST00000642101 219 ntBASIC18.15■□□□□ 0.5
MRE11P49959 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.15■□□□□ 0.5
MRE11P49959 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.15■□□□□ 0.5
MRE11P49959 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC18.15■□□□□ 0.5
MRE11P49959 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.15■□□□□ 0.5
MRE11P49959 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MRE11P49959 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 AC097359.2-201ENST00000604992 2389 ntBASIC18.15■□□□□ 0.5
MRE11P49959 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.15■□□□□ 0.5
MRE11P49959 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRE11P49959 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MRE11P49959 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MRE11P49959 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MRE11P49959 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MRE11P49959 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC18.14■□□□□ 0.5
MRE11P49959 COL6A4P2-202ENST00000504443 2753 ntBASIC18.14■□□□□ 0.5
MRE11P49959 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
MRE11P49959 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.14■□□□□ 0.5
MRE11P49959 KCP-203ENST00000610776 5108 ntTSL 5 BASIC18.14■□□□□ 0.5
MRE11P49959 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
MRE11P49959 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MRE11P49959 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MRE11P49959 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MRE11P49959 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.14■□□□□ 0.49
MRE11P49959 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 AC236430.1-201ENST00000402231 743 ntBASIC18.14■□□□□ 0.49
MRE11P49959 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.14■□□□□ 0.49
MRE11P49959 AC245100.5-201ENST00000452108 331 ntBASIC18.14■□□□□ 0.49
MRE11P49959 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.14■□□□□ 0.49
MRE11P49959 INGX-202ENST00000489074 768 ntBASIC18.14■□□□□ 0.49
MRE11P49959 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.14■□□□□ 0.49
MRE11P49959 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.14■□□□□ 0.49
MRE11P49959 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MRE11P49959 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.14■□□□□ 0.49
MRE11P49959 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.14■□□□□ 0.49
MRE11P49959 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC18.14■□□□□ 0.49
MRE11P49959 AC107918.4-202ENST00000641623 219 ntBASIC18.14■□□□□ 0.49
MRE11P49959 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.14■□□□□ 0.49
MRE11P49959 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MRE11P49959 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
MRE11P49959 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MRE11P49959 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC18.13■□□□□ 0.49
MRE11P49959 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.13■□□□□ 0.49
MRE11P49959 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.13■□□□□ 0.49
MRE11P49959 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.13■□□□□ 0.49
MRE11P49959 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.13■□□□□ 0.49
MRE11P49959 AC025678.2-201ENST00000562061 970 ntBASIC18.13■□□□□ 0.49
MRE11P49959 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.13■□□□□ 0.49
MRE11P49959 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.13■□□□□ 0.49
MRE11P49959 AP000867.4-201ENST00000641616 219 ntBASIC18.13■□□□□ 0.49
MRE11P49959 AC127383.1-201ENST00000444697 1800 ntBASIC18.13■□□□□ 0.49
MRE11P49959 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.13■□□□□ 0.49
MRE11P49959 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MRE11P49959 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms