Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC4P35249 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.17■□□□□ 0.66
RFC4P35249 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RFC4P35249 LTB4R2-202ENST00000528054 3092 ntBASIC19.17■□□□□ 0.66
RFC4P35249 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC4P35249 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RFC4P35249 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RFC4P35249 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RFC4P35249 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RFC4P35249 RN7SKP214-201ENST00000364208 315 ntBASIC19.17■□□□□ 0.66
RFC4P35249 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.17■□□□□ 0.66
RFC4P35249 AC019193.1-201ENST00000506678 823 ntBASIC19.17■□□□□ 0.66
RFC4P35249 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC4P35249 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.17■□□□□ 0.66
RFC4P35249 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.17■□□□□ 0.66
RFC4P35249 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC4P35249 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 AC009955.4-201ENST00000597192 544 ntBASIC19.17■□□□□ 0.66
RFC4P35249 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.17■□□□□ 0.66
RFC4P35249 AC006453.1-201ENST00000636037 1257 ntBASIC19.17■□□□□ 0.66
RFC4P35249 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC4P35249 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC4P35249 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC4P35249 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC4P35249 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC4P35249 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RFC4P35249 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.16■□□□□ 0.66
RFC4P35249 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RFC4P35249 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.16■□□□□ 0.66
RFC4P35249 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 PDIA3P2-201ENST00000428073 158 ntBASIC19.16■□□□□ 0.66
RFC4P35249 HLA-K-203ENST00000430151 1046 ntBASIC19.16■□□□□ 0.66
RFC4P35249 FGFR3P1-201ENST00000449999 601 ntBASIC19.16■□□□□ 0.66
RFC4P35249 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 AC116345.2-201ENST00000512837 523 ntBASIC19.16■□□□□ 0.66
RFC4P35249 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 AC090857.1-201ENST00000527400 390 ntBASIC19.16■□□□□ 0.66
RFC4P35249 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 AL160314.3-201ENST00000556041 767 ntBASIC19.16■□□□□ 0.66
RFC4P35249 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 REXO1L5P-201ENST00000622260 2098 ntBASIC19.16■□□□□ 0.66
RFC4P35249 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RFC4P35249 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC4P35249 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC4P35249 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC4P35249 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC4P35249 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RFC4P35249 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RFC4P35249 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC4P35249 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC4P35249 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RFC4P35249 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RFC4P35249 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms